Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile
Accession NumberCAAJMV000000000.1
Gene Summary
Adenine Count
1521917 bp
Thymine Count
1576850 bp
Guanine Count
584417 bp
Cytosine Count
633911 bp
Genome Length
4317273 bp
Protein-coding Genes
3615 genes
Non-Coding Genes
410 genes
# of Chromosomes/Plasmids
37
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-ornithine aminomutase s component | SAMEA747647_01221 | Not Available | + | 1217035 - 1217409 | 14182.3 |
| d-ornithine aminomutase e component | SAMEA747647_01222 | Not Available | + | 1217403 - 1219607 | 82726.0 |
| reactivating factor for adenosylcobalamine-dependent d-ornithine aminomutase | SAMEA747647_01223 | Not Available | + | 1219607 - 1221016 | 51778.7 |
| ornithine racemase | SAMEA747647_01224 | Not Available | + | 1221001 - 1222065 | 39954.8 |
| na+/h+ antiporter, nhaa family | SAMEA747647_01225 | Not Available | + | 1222095 - 1223516 | 50278.4 |
| transcriptional regulator | SAMEA747647_01226 | Not Available | + | 1223952 - 1224416 | 17669.3 |
| dioxygenase | SAMEA747647_01227 | Not Available | + | 1224646 - 1225008 | 13911.8 |
| multi-sensor hybrid histidine kinase | SAMEA747647_01228 | Not Available | - | 1225458 - 1228016 | 96546.1 |
| uncharacterised protein | SAMEA747647_01229 | Not Available | - | 1228022 - 1228384 | 14193.0 |
| response regulator receiver modulated metal dependent phosphohydrolase | SAMEA747647_01230 | Not Available | - | 1228386 - 1230026 | 63042.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.