Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile
Accession NumberCAAJMV000000000.1
Gene Summary
Adenine Count
1521917 bp
Thymine Count
1576850 bp
Guanine Count
584417 bp
Cytosine Count
633911 bp
Genome Length
4317273 bp
Protein-coding Genes
3615 genes
Non-Coding Genes
410 genes
# of Chromosomes/Plasmids
37
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | SAMEA747647_01211 | Not Available | + | 1204350 - 1205123 | 29569.0 |
| ubiquitin-associated domain-containing protein | SAMEA747647_01212 | Not Available | + | 1205113 - 1205715 | 22232.8 |
| glycyl-trna ligase subunit alpha | SAMEA747647_01213 | Not Available | + | 1205875 - 1206753 | 33860.2 |
| glycyl-trna ligase subunit beta | SAMEA747647_01214 | Not Available | + | 1206753 - 1208819 | 78432.4 |
| nitrite/sulfite reductase | SAMEA747647_01215 | Not Available | - | 1208985 - 1210532 | 58211.2 |
| iclr family transcriptional regulator | SAMEA747647_01216 | Not Available | + | 1210812 - 1211579 | 28879.9 |
| sigma-54 dependent transcriptional regulator | SAMEA747647_01217 | Not Available | + | 1212421 - 1213794 | 52582.8 |
| 2,4-diaminopentanoate dehydrogenase | SAMEA747647_01218 | Not Available | + | 1214061 - 1215128 | 38725.2 |
| 2-amino-4-ketopentanoate thiolase subunit alpha | SAMEA747647_01219 | Not Available | + | 1215226 - 1215534 | 11498.0 |
| pyridoxal-phosphate dependent enzyme | SAMEA747647_01220 | Not Available | + | 1215527 - 1216957 | 52385.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.