Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile
Accession NumberCAAJMV000000000.1
Gene Summary
Adenine Count
1521917 bp
Thymine Count
1576850 bp
Guanine Count
584417 bp
Cytosine Count
633911 bp
Genome Length
4317273 bp
Protein-coding Genes
3615 genes
Non-Coding Genes
410 genes
# of Chromosomes/Plasmids
37
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated caax amino terminal protease | SAMEA747647_01108 | Not Available | + | 1100111 - 1101091 | 37974.0 |
| membrane protein | SAMEA747647_01109 | Not Available | - | 1101213 - 1102151 | 35862.1 |
| 4-hydroxyphenylacetate decarboxylase activating subunit | SAMEA747647_01110 | Not Available | - | 1102467 - 1103417 | 35944.4 |
| 4-hydroxyphenylacetate decarboxylase,regulatory subunit hpdc | SAMEA747647_01111 | Not Available | - | 1103410 - 1103667 | 9504.47 |
| 4-hydroxyphenylacetate decarboxylase,catalytic subunit hpdb | SAMEA747647_01112 | Not Available | - | 1103671 - 1106379 | 101300.0 |
| ugmp family protein | SAMEA747647_01113 | Not Available | - | 1106676 - 1107692 | 36494.7 |
| alanine acetyltransferase, ribosomal family | SAMEA747647_01114 | Not Available | - | 1107698 - 1108174 | 18367.0 |
| peptidase, m22 family | SAMEA747647_01115 | Not Available | - | 1108164 - 1108880 | 26476.1 |
| p-loop atpases | SAMEA747647_01116 | Not Available | - | 1108880 - 1109332 | 17227.7 |
| uncharacterised protein | SAMEA747647_01117 | Not Available | - | 1109471 - 1110511 | 40774.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.