Clostridium cochlearium

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium cochlearium
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpit mud; silage
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium cochlearium

Accession NumberFNGL00000000.1

Gene Summary

Adenine Count

869942 bp

Thymine Count

852263 bp

Guanine Count

343929 bp

Cytosine Count

334378 bp

Genome Length

2400722 bp

Protein-coding Genes

2331 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cardiolipin synthaseSAMN05216497_105105Not Available+977598 - 97812820427.2
protein of unknown functionSAMN05216497_105106Not Available-978150 - 9783658250.9
chorismate mutaseSAMN05216497_105107Not Available-978391 - 97882816568.4
l,d-transpeptidase catalytic domainSAMN05216497_105108Not Available-979002 - 98050156616.1
primary replicative dna helicaseSAMN05216497_105109Not Available-980610 - 98194449749.9
atp-dependent lon proteaseSAMN05216497_105110Not Available-982000 - 98388670645.0
lsu ribosomal protein l9pSAMN05216497_105111Not Available-983905 - 98434816776.4
c-di-amp phosphodiesterase, consists of a ggdef-like and dhh domainsSAMN05216497_105112Not Available-984345 - 98633975418.9
uncharacterized conserved protein yybs, duf2232 familySAMN05216497_105113Not Available-986353 - 98734236988.2
mazg-like family proteinSAMN05216497_105114Not Available-987356 - 98767311935.7

Displaying genes 981 – 990 of 2393 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0003659(2S,3S)-3-methyl-L-aspartateC5H8NO4Chemical structure of (2S,3S)-3-methyl-L-aspartateNot available
Average146.123Da
Monoisotopic146.0458813Da

Displaying 1–1 of 1 metabolites