Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium butyricum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium butyricum
Accession NumberRSEV00000000.1
Gene Summary
Adenine Count
1629875 bp
Thymine Count
1627298 bp
Guanine Count
655174 bp
Cytosine Count
655185 bp
Genome Length
4578933 bp
Protein-coding Genes
3843 genes
Non-Coding Genes
218 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | EI970_09560 | Not Available | + | 2050440 - 2050931 | 18768.5 |
| serine/threonine protein kinase | EI970_09565 | Not Available | - | 2050975 - 2051559 | 22958.4 |
| trk system potassium transporter trka | EI970_09570 | Not Available | + | 2051831 - 2053210 | 50581.3 |
| trkh family potassium uptake protein | EI970_09575 | Not Available | + | 2053200 - 2054648 | 52378.9 |
| rrna pseudouridine synthase | EI970_09580 | Not Available | + | 2054820 - 2055536 | 27413.6 |
| murr/rpir family transcriptional regulator | EI970_09585 | Not Available | + | 2055705 - 2056601 | 33169.2 |
| polynucleotide adenylyltransferase | EI970_09590 | Not Available | + | 2056691 - 2058007 | 51177.5 |
| competence protein | EI970_09595 | Not Available | + | 2058163 - 2058426 | 9989.44 |
| penicillin-binding transpeptidase domain-containing protein | EI970_09600 | Not Available | + | 2058587 - 2060623 | 75335.6 |
| sensor histidine kinase | EI970_09605 | Not Available | + | 2060943 - 2064170 | 122104.0 |
Pathways
67 pathways
Metabolic pathways involved in hydrogen production from bread waste, which are predicted using the G2KO-KEGG tool for Dark fermentation
Metabolic pathways involved in hydrogen production from bread waste, which are predicted using the G2KO-KEGG tool for Dark fermentation
Plasmalogen biosynthesis
Plasmalogen biosynthesis
