Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium butyricum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clostridium butyricum
Accession NumberRSEV00000000.1
Gene Summary
Adenine Count
1629875 bp
Thymine Count
1627298 bp
Guanine Count
655174 bp
Cytosine Count
655185 bp
Genome Length
4578933 bp
Protein-coding Genes
3843 genes
Non-Coding Genes
218 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | EI970_04445 | Not Available | + | 883427 - 884047 | 23593.8 |
| d-alanine--d-alanine ligase | EI970_04450 | Not Available | + | 884154 - 885059 | 33155.3 |
| response regulator transcription factor | EI970_04455 | Not Available | + | 885214 - 885921 | 27272.1 |
| two-component sensor histidine kinase | EI970_04460 | Not Available | + | 885911 - 887428 | 58289.3 |
| muramidase | EI970_04465 | Not Available | + | 887510 - 888451 | 35973.6 |
| vanomycin resistance protein vanb | EI970_04470 | Not Available | + | 888703 - 890235 | 55104.0 |
| trna (cytidine(34)-2'-o)-methyltransferase | EI970_04475 | Not Available | + | 890420 - 890884 | 17738.2 |
| degv family protein | EI970_04480 | Not Available | + | 890904 - 891740 | 31048.9 |
| rna polymerase factor sigma-54 | EI970_04485 | Not Available | + | 892027 - 893409 | 53712.4 |
| sugar-binding transcriptional regulator | EI970_04490 | Not Available | + | 893774 - 894832 | 38577.8 |
Pathways
67 pathways
Metabolic pathways involved in hydrogen production from bread waste, which are predicted using the G2KO-KEGG tool for Dark fermentation
Metabolic pathways involved in hydrogen production from bread waste, which are predicted using the G2KO-KEGG tool for Dark fermentation
Plasmalogen biosynthesis
Plasmalogen biosynthesis
