Paenibacillus polymyxa str. YC0136

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa strain YC0136 is a Gram-positive, rod-shaped bacterium that demonstrates the capability of sporulation, allowing it to survive in various environments. This strain is classified as a chemoheterotroph, indicating that it derives energy from organic compounds, adapting to utilize a range of substrates for growth. P. polymyxa str. YC0136 thrives optimally at a temperature of 37.0°C, which is typical for many mesophilic bacteria. As a facultative anaerobe, this strain can grow in both the presence and absence of oxygen, providing it with a versatile metabolic flexibility that enables colonization of diverse habitats. The ability to sporulate is particularly advantageous, allowing it to withstand unfavorable conditions, such as desiccation or nutrient limitation, thereby extending its ecological range. This versatility in energy utilization and growth conditions suggests that P. polymyxa str. YC0136 may play a significant role in various biogeochemical cycles, particularly in nutrient cycling within its habitats. Its sporulating nature may also contribute to its persistence in environments subject to fluctuation, making it a potential candidate for applications in agriculture or bioremediation, where resilience and adaptability are crucial for sustainability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus polymyxa str. YC0136
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus polymyxa str. YC0136

Accession NumberNZ_CP017967.2

Gene Summary

Adenine Count

1522487 bp

Thymine Count

1527686 bp

Guanine Count

1279056 bp

Cytosine Count

1292499 bp

Genome Length

5621728 bp

Protein-coding Genes

4808 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chaperone csaaPPYC1_RS02760Not Available+619574 - 61990611874.7
uvrd-helicase domain-containing proteinPPYC1_RS02765Not Available-620138 - 62256489826.1
zinc ribbon domain-containing proteinPPYC1_RS02770Not Available+622875 - 62372632565.9
trmb family transcriptional regulatorPPYC1_RS02775Not Available+623792 - 62458029984.0
nudix hydrolasePPYC1_RS02780Not Available-624588 - 62522023675.7
hypothetical proteinPPYC1_RS02785Not Available+625393 - 62568611408.8
histidine phosphatase family proteinPPYC1_RS02790Not Available+625759 - 62646026809.8
large conductance mechanosensitive channel protein msclPPYC1_RS02795Not Available-626546 - 62704017724.1
carboxymuconolactone decarboxylase family proteinPPYC1_RS02800Not Available+627192 - 62763517067.7
sigma-70 family rna polymerase sigma factorPPYC1_RS02805Not Available+627655 - 62861436735.4

Displaying genes 591 – 600 of 4964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites