Pseudolactococcus raffinolactis

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Pseudolactococcus raffinolactis is a Gram-positive coccus that thrives in a variety of fermented environments, including fermented cabbage, kimchi, and other fermented foods such as vegetables, fish, meat, and milk. This facultative anaerobe is capable of surviving both in the presence and absence of oxygen, which allows it to flourish in diverse fermentation conditions. The presence of Pseudolactococcus raffinolactis in foods indicates its potential role in the fermentation process, where it may contribute to the development of flavor and preservation. Its adaptability to different substrates, notably those rich in carbohydrates, suggests that it may play a significant role in the microbial dynamics of fermented products. The ability of this microbe to inhabit a wide range of environments emphasizes its importance in the food industry, particularly in the production of traditional fermented goods. Additionally, the versatility of Pseudolactococcus raffinolactis in various fermentation scenarios hints at its potential utility in biotechnological applications, such as the development of probiotics or in enhancing the quality of fermented foods. This adaptability reflects broader ecological interactions and highlights the significance of microbial diversity in food fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudolactococcus raffinolactis

Accession NumberJXJY00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2107 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinRU88_GL000236Not Available-981239 - 9814909908.52
Putative lysinRU88_GL000237Not Available-981864 - 98303342452.6
HolinRU88_GL000238Not Available-983126 - 98352714640.5
Receptor-binding tail proteinRU88_GL000239Not Available-983540 - 98438830971.7
Gp16RU88_GL000240Not Available-984399 - 98526832807.5
Putative phage structural proteinRU88_GL000241Not Available-985439 - 98683952390.3
Tail tape measureRU88_GL000242Not Available-986840 - 990619136599.0
hypothetical proteinRU88_GL000243Not Available-990619 - 99090611219.0
hypothetical proteinRU88_GL000244Not Available-990933 - 99122311022.0
hypothetical proteinRU88_GL000245Not Available-991278 - 99183519963.8

Displaying genes 1 – 10 of 2171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm00015513D-3,5/4-trihydroxycyclohexane-1,2-dioneC6H8O5Chemical structure of 3D-3,5/4-trihydroxycyclohexane-1,2-dioneNot available
Average160.125Da
Monoisotopic160.0371734Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001749terephthalateC8H4O4Chemical structure of terephthalateNot available
Average164.1161Da
Monoisotopic164.012055776Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da

Displaying 11–20 of 209 metabolites