Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cobalt abc transporter atp-binding protein | RU88_GL001013 | Not Available | + | 1644534 - 1645322 | 28663.8 |
| transporter | RU88_GL001014 | Not Available | + | 1645357 - 1646115 | 28505.3 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | RU88_GL001015 | Not Available | + | 1646164 - 1646859 | 23920.0 |
| hypothetical protein | RU88_GL001016 | Not Available | + | 1646878 - 1647102 | 8300.71 |
| n-acetyldiaminopimelate deacetylase | RU88_GL001017 | Not Available | + | 1647130 - 1648275 | 41925.5 |
| rna polymerase factor sigma-54 | RU88_GL001018 | Not Available | - | 1648505 - 1649890 | 53007.9 |
| ntrc family transcriptional regulator, atpase domain | RU88_GL001019 | Not Available | + | 1650028 - 1652769 | 102398.0 |
| pts fructose transporter subunit iia | RU88_GL001020 | Not Available | + | 1652965 - 1653408 | 16194.5 |
| pts friuctose transporter subunit iib | RU88_GL001021 | Not Available | + | 1653456 - 1653896 | 16251.7 |
| pts mannose transporter subunit iic | RU88_GL001022 | Not Available | + | 1653963 - 1654757 | 27715.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
