Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein | RU88_GL002081 | Not Available | - | 911672 - 912667 | 37617.2 |
| amidophosphoribosyltransferase | RU88_GL002082 | Not Available | - | 912794 - 914221 | 52122.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | RU88_GL002083 | Not Available | - | 914683 - 915783 | 39391.8 |
| guanine permease | RU88_GL002084 | Not Available | - | 915978 - 917417 | 49861.7 |
| had hydrolase | RU88_GL002085 | Not Available | + | 917680 - 918492 | 30278.0 |
| phage infection protein | RU88_GL002086 | Not Available | - | 918754 - 921153 | 83768.2 |
| tetr family transcriptional regulator | RU88_GL002087 | Not Available | + | 921306 - 921842 | 20797.2 |
| dna polymerase iii subunit epsilon | RU88_GL002088 | Not Available | - | 921850 - 922446 | 21881.7 |
| membrane protein | RU88_GL002089 | Not Available | - | 922579 - 922911 | 12026.0 |
| nad(p)h nitroreductase | RU88_GL002090 | Not Available | - | 923168 - 923803 | 23757.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
