Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RU88_GL001983 | Not Available | - | 825806 - 828049 | 86655.3 |
| hypothetical protein | RU88_GL001984 | Not Available | - | 828098 - 828319 | 8826.66 |
| gmp synthase | RU88_GL001985 | Not Available | - | 828641 - 830194 | 56886.0 |
| rna pseudouridine synthase | RU88_GL001986 | Not Available | - | 830288 - 831187 | 33264.1 |
| lipoprotein signal peptidase | RU88_GL001987 | Not Available | - | 831194 - 831652 | 17116.6 |
| dna topoisomerase iv subunit a | RU88_GL001988 | Not Available | - | 831715 - 834162 | 91699.7 |
| trka-n domain protein | RU88_GL001989 | Not Available | - | 834181 - 834834 | 23606.4 |
| potassium uptake protein, integral membrane component, ktrb | RU88_GL001990 | Not Available | - | 834877 - 836217 | 49791.1 |
| dna topoisomerase iv subunit b | RU88_GL001991 | Not Available | - | 836220 - 838175 | 71934.4 |
| hypothetical protein | RU88_GL001992 | Not Available | + | 838452 - 838568 | 4631.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
