Pseudolactococcus raffinolactis

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Pseudolactococcus raffinolactis is a Gram-positive coccus that thrives in a variety of fermented environments, including fermented cabbage, kimchi, and other fermented foods such as vegetables, fish, meat, and milk. This facultative anaerobe is capable of surviving both in the presence and absence of oxygen, which allows it to flourish in diverse fermentation conditions. The presence of Pseudolactococcus raffinolactis in foods indicates its potential role in the fermentation process, where it may contribute to the development of flavor and preservation. Its adaptability to different substrates, notably those rich in carbohydrates, suggests that it may play a significant role in the microbial dynamics of fermented products. The ability of this microbe to inhabit a wide range of environments emphasizes its importance in the food industry, particularly in the production of traditional fermented goods. Additionally, the versatility of Pseudolactococcus raffinolactis in various fermentation scenarios hints at its potential utility in biotechnological applications, such as the development of probiotics or in enhancing the quality of fermented foods. This adaptability reflects broader ecological interactions and highlights the significance of microbial diversity in food fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudolactococcus raffinolactis

Accession NumberJXJY00000000.1

Gene Summary

Adenine Count

665942 bp

Thymine Count

669817 bp

Guanine Count

434714 bp

Cytosine Count

443434 bp

Genome Length

2213917 bp

Protein-coding Genes

2107 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna-binding proteinRU88_GL001815Not Available-744247 - 74493926390.0
glycerol-3-phosphate acyltransferaseRU88_GL001816Not Available+745039 - 74568023511.3
glutaredoxinRU88_GL001817Not Available+745827 - 7460036599.13
ribonucleotide reduction protein nrdiRU88_GL001818Not Available+746021 - 74635612672.9
ribonucleotide-diphosphate reductase subunit alphaRU88_GL001819Not Available+746361 - 74851481493.4
ribonucleoside-diphosphate reductase, beta subunitRU88_GL001820Not Available+748632 - 74959436740.9
glutathione s-transferaseRU88_GL001821Not Available-749650 - 75051933363.7
30s ribosomal protein s9RU88_GL001822Not Available-750555 - 7506925243.44
arsenate reductaseRU88_GL001823Not Available-750820 - 75117013031.2
hypothetical proteinRU88_GL001824Not Available-751414 - 75258341114.3

Displaying genes 781 – 790 of 2171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 209 metabolites