Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | RU88_GL001301 | Not Available | + | 1808752 - 1809030 | 10692.1 |
| integrase | RU88_GL001302 | Not Available | + | 1809105 - 1810319 | 47016.7 |
| 30s ribosomal protein s9 | RU88_GL001303 | Not Available | - | 1810436 - 1810828 | 14159.2 |
| 50s ribosomal protein l13 | RU88_GL001304 | Not Available | - | 1810842 - 1811288 | 16323.9 |
| ribonuclease hiii | RU88_GL001305 | Not Available | + | 1811458 - 1812336 | 32106.7 |
| signal peptidase | RU88_GL001306 | Not Available | + | 1812381 - 1812926 | 20642.1 |
| phosphoribosyl-atp pyrophosphatase | RU88_GL001307 | Not Available | - | 1813013 - 1813300 | 10465.3 |
| phosphoribosyl-amp cyclohydrolase | RU88_GL001308 | Not Available | - | 1813324 - 1813689 | 13676.1 |
| imidazole glycerol phosphate synthase | RU88_GL001309 | Not Available | - | 1813691 - 1814449 | 26962.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | RU88_GL001310 | Not Available | - | 1814451 - 1815116 | 23427.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
