Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | + | 1524999 - 1525068 | Not Available |
| hypothetical protein | RU88_GL000905 | Not Available | + | 1525257 - 1525469 | 8305.06 |
| phage integrase | RU88_GL000906 | Not Available | + | 1525570 - 1526748 | 45663.4 |
| thymidine kinase | RU88_GL000907 | Not Available | + | 1526892 - 1527461 | 21600.2 |
| hypothetical protein | RU88_GL000908 | Not Available | + | 1527490 - 1528002 | 19462.2 |
| peptide chain release factor 1 | RU88_GL000909 | Not Available | + | 1528072 - 1529145 | 40190.6 |
| adenine glycosylase | RU88_GL000910 | Not Available | + | 1529184 - 1530209 | 38967.6 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | RU88_GL000911 | Not Available | + | 1530248 - 1531021 | 28574.9 |
| trna threonylcarbamoyl adenosine modification protein | RU88_GL000912 | Not Available | + | 1531068 - 1531640 | 20795.1 |
| serine hydroxymethyltransferase | RU88_GL000913 | Not Available | + | 1531759 - 1532883 | 39840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
