Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase | RU88_GL000606 | Not Available | + | 1361667 - 1361972 | 11771.2 |
| glutamate decarboxylase | RU88_GL000607 | Not Available | - | 1362031 - 1363434 | 52806.9 |
| formate acetyltransferase | RU88_GL000608 | Not Available | - | 1363644 - 1365944 | 86499.0 |
| divalent cation transport-related protein | RU88_GL000609 | Not Available | - | 1366145 - 1367059 | 35229.8 |
| hypothetical protein | RU88_GL000610 | Not Available | - | 1367083 - 1368207 | 42599.3 |
| enolase | RU88_GL000611 | Not Available | - | 1368307 - 1369632 | 48077.9 |
| ribosome-associated factor y | RU88_GL000612 | Not Available | - | 1369863 - 1370471 | 23398.9 |
| atp-dependent clp protease atp-binding protein | RU88_GL000613 | Not Available | - | 1370505 - 1372949 | 89616.6 |
| ctsr family transcriptional regulator | RU88_GL000614 | Not Available | - | 1372978 - 1373442 | 17758.8 |
| dna-binding protein | RU88_GL000615 | Not Available | + | 1373808 - 1374509 | 26616.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
