Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Pseudolactococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Streptococcaceae |
| Genus | Pseudolactococcus |
| Species | Pseudolactococcus raffinolactis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudolactococcus raffinolactis
Accession NumberJXJY00000000.1
Gene Summary
Adenine Count
665942 bp
Thymine Count
669817 bp
Guanine Count
434714 bp
Cytosine Count
443434 bp
Genome Length
2213917 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | RU88_GL000346 | Not Available | - | 1088444 - 1089112 | 24225.9 |
| cysteine desulfhydrase | RU88_GL000347 | Not Available | - | 1089235 - 1090401 | 43712.1 |
| cystathionine gamma-synthase | RU88_GL000348 | Not Available | - | 1090408 - 1091517 | 40327.3 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain ii | RU88_GL000349 | Not Available | - | 1091646 - 1093163 | 55042.3 |
| lacx protein, plasmid | RU88_GL000350 | Not Available | - | 1093200 - 1094072 | 32962.8 |
| regulatory protein, tetr | RU88_GL000351 | Not Available | + | 1094280 - 1094846 | 21770.1 |
| 3-5 exoribonuclease | RU88_GL000352 | Not Available | - | 1094909 - 1095814 | 34683.9 |
| hypothetical protein | RU88_GL000353 | Not Available | - | 1095856 - 1097889 | 77523.7 |
| dna double-strand break repair protein mre11 | RU88_GL000354 | Not Available | - | 1098011 - 1099147 | 43074.9 |
| ribulose-phosphate 3-epimerase | RU88_GL000355 | Not Available | - | 1099219 - 1099764 | 19692.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
