Streptococcus parauberis str. SK-417

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus parauberis strain SK-417 is a Gram-positive coccus that thrives in aquaculture environments, exhibiting facultative anaerobic growth capabilities. This microbe's spherical shape is characteristic of the Streptococcus genus, which is known for its diverse ecological roles and interactions within aquatic ecosystems. As a facultative anaerobe, S. parauberis str. SK-417 can adapt to varying oxygen levels, allowing it to survive in both oxygen-rich and low-oxygen conditions commonly found in aquaculture systems. This adaptability is crucial in environments where oxygen availability may fluctuate due to factors such as water quality, density of aquatic organisms, and organic load. In the context of aquaculture, the presence of Streptococcus parauberis str. SK-417 may indicate its potential role in microbial communities associated with fish or shellfish farming, possibly contributing to nutrient cycling or influencing the microbial dynamics within aquaculture systems. Understanding the specific interactions and functions of this strain could provide insights into maintaining healthy aquatic environments and optimizing aquaculture practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus parauberis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquaculture
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptococcus parauberis str. SK-417

Accession NumberBAWT00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1949 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
p-loop atpase protein family proteinSS13_contig00001-0008Not Available-7921 - 881433862.7
inosine-uridine preferring nucleoside hydrolaseSS13_contig00001-0009Not Available+9175 - 961217128.7
asparaginyl-trna synthetaseSS13_contig00001-0010Not Available-9635 - 1098150999.3
aspartate aminotransferaseSS13_contig00001-0011Not Available-11006 - 1220543652.7
atp-dependent dna helicaseSS13_contig00001-0012Not Available-12330 - 1483495634.2
metallo-beta-lactamase superfamily proteinSS13_contig00001-0013Not Available+14966 - 1560123547.9
cell division protein ftsxSS13_contig00001-0014Not Available-15643 - 1657235194.3
cell division atp-binding proteinSS13_contig00001-0015Not Available-16565 - 1725726227.9
peptide chain release factor 2SS13_contig00001-0016Not Available-17287 - 1827037271.6
iron-sulfur cluster-binding proteinSS13_contig00001-0017Not Available-18437 - 1954340847.4

Displaying genes 11 – 20 of 1988 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

190 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da

Displaying 1–10 of 190 metabolites