Synechococcus elongatus PCC 7942 = FACHB-805

Gram-negativeRodMotileFacultative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus elongatus PCC 7942, also known as FACHB-805, is a Gram-negative, rod-shaped cyanobacterium that exhibits a versatile growth pattern, forming both single cells and chains. This microbe thrives in aquatic environments and is classified as a photoautotroph, utilizing light as its primary energy source for growth and metabolism. Additionally, it demonstrates facultative oxygen requirements, allowing it to adapt to varying oxygen levels in its habitat. The photosynthetic capabilities of Synechococcus elongatus PCC 7942 enable it to contribute significantly to primary production in aquatic ecosystems, where it plays a crucial role in carbon fixation. The organism's ability to form chains may enhance its survival and adaptability in diverse aquatic environments by promoting nutrient uptake and facilitating buoyancy. Given its ecological role, Synechococcus elongatus PCC 7942 serves as an important model organism for studying photosynthesis and microbial ecology. Its adaptability to different oxygen concentrations reflects the dynamic nature of aquatic habitats and underscores the potential impact of environmental changes on microbial community structures. This adaptability may also provide insights into the evolution of photosynthetic organisms in fluctuating environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus elongatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Synechococcus elongatus PCC 7942 = FACHB-805
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourcePhotosynthetic - Photoautotroph
PathogenicityNot Available

Genome Summary

Synechococcus elongatus PCC 7942 = FACHB-805

Accession NumberNC_007604.1

Gene Summary

Adenine Count

601094 bp

Thymine Count

599391 bp

Guanine Count

748430 bp

Cytosine Count

746988 bp

Genome Length

2695903 bp

Protein-coding Genes

2638 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nucleotidyltransferase family proteinSYNPCC7942_RS13335Not Available-65 - 39412258.9
parb/repb/spo0j family partition proteinSYNPCC7942_RS13640Not Available-497 - 132130151.2
para family proteinSYNPCC7942_RS13345Not Available-1318 - 192921111.4
hypothetical proteinSYNPCC7942_RS13350Not Available+2063 - 23299845.43
type ii toxin-antitoxin system vapc family toxinSYNPCC7942_RS13355Not Available+2340 - 272314155.3
rhodanese-like domain-containing proteinSYNPCC7942_RS13360Q1IG23-2720 - 307012279.4
family 2a encapsulin nanocompartment cargo protein cysteine desulfurase cydSYNPCC7942_RS13365Q8KUU5-3160 - 504067208.7
family 2a encapsulin nanocompartment shell protein srpiSYNPCC7942_RS13370Q55032-5275 - 619534362.2
serine o-acetyltransferase epscSYNPCC7942_RS13375Q59967-6290 - 724934572.2
cysteine synthase aSYNPCC7942_RS13380Q59966-7246 - 823534602.7

Displaying genes 1 – 10 of 2762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

156 records
Metabolite IDMetabolite nameStructureCAS number
BASm00110183-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-2-oneC13H19N2O2Chemical structure of 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-2-oneNot available
Average235.306Da
Monoisotopic235.1441043Da
BASm0011580dZMPC10H13N6O6PChemical structure of dZMPNot available
Average344.225Da
Monoisotopic344.06451632Da
BASm0011581dZDPC10H13N6O9P2Chemical structure of dZDPNot available
Average423.196Da
Monoisotopic423.023570758Da
BASm0011582dZTPC10H13N6O12P3Chemical structure of dZTPNot available
Average502.167Da
Monoisotopic501.982625196Da
BASm00121361,6-dihydroxyphenazine N(5),N(10)-dioxideC12H6N2O4Not availableNot available
Average242.191Da
Monoisotopic242.033853841Da
BASm0012597(6R)-10-formyltetrahydrofolateC20H21N7O7Chemical structure of (6R)-10-formyltetrahydrofolateNot available
Average471.431Da
Monoisotopic471.151343204Da

Displaying 151–156 of 156 metabolites