Synechococcus elongatus PCC 7942 = FACHB-805

Gram-negativeRodMotileFacultative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus elongatus PCC 7942, also known as FACHB-805, is a Gram-negative, rod-shaped cyanobacterium that exhibits a versatile growth pattern, forming both single cells and chains. This microbe thrives in aquatic environments and is classified as a photoautotroph, utilizing light as its primary energy source for growth and metabolism. Additionally, it demonstrates facultative oxygen requirements, allowing it to adapt to varying oxygen levels in its habitat. The photosynthetic capabilities of Synechococcus elongatus PCC 7942 enable it to contribute significantly to primary production in aquatic ecosystems, where it plays a crucial role in carbon fixation. The organism's ability to form chains may enhance its survival and adaptability in diverse aquatic environments by promoting nutrient uptake and facilitating buoyancy. Given its ecological role, Synechococcus elongatus PCC 7942 serves as an important model organism for studying photosynthesis and microbial ecology. Its adaptability to different oxygen concentrations reflects the dynamic nature of aquatic habitats and underscores the potential impact of environmental changes on microbial community structures. This adaptability may also provide insights into the evolution of photosynthetic organisms in fluctuating environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus elongatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Synechococcus elongatus PCC 7942 = FACHB-805
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourcePhotosynthetic - Photoautotroph
PathogenicityNot Available

Genome Summary

Synechococcus elongatus PCC 7942 = FACHB-805

Accession NumberNC_007604.1

Gene Summary

Adenine Count

601094 bp

Thymine Count

599391 bp

Guanine Count

748430 bp

Cytosine Count

746988 bp

Genome Length

2695903 bp

Protein-coding Genes

2638 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ferredoxin:protochlorophyllide reductase (atp-dependent) iron-sulfur atp-binding proteinSYNPCC7942_RS07260P54207+1472585 - 147344531119.5
ferredoxin:protochlorophyllide reductase (atp-dependent) subunit nSYNPCC7942_RS07265P54208+1473509 - 147490951543.3
carbon dioxide-concentrating mechanism protein ccmkSYNPCC7942_RS07270Q03511+1475239 - 147554710904.3
eutn/ccml family microcompartment proteinSYNPCC7942_RS07275Q03512+1475694 - 147599311017.1
ribulose bisphosphate carboxylase small subunitSYNPCC7942_RS07280Q03513+1476059 - 147767857836.1
hypothetical proteinSYNPCC7942_RS07285P46204+1477713 - 147819816327.8
carbon dioxide-concentrating mechanism protein ccmkSYNPCC7942_RS07290P46205+1478240 - 147907029432.6
form i ribulose bisphosphate carboxylase large subunitSYNPCC7942_RS07295Q31NB3+1479461 - 148087952450.6
ribulose bisphosphate carboxylase small subunitSYNPCC7942_RS07300Q31NB2+1480970 - 148130513333.9
5-(carboxyamino)imidazole ribonucleotide synthaseSYNPCC7942_RS07305Q54975+1481407 - 148259442461.9

Displaying genes 1531 – 1540 of 2762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

156 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 156 metabolites