Chlorobium limicola str. Frasassi

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Chlorobiota

Class

Chlorobiia

Order

Chlorobiales

Family

Chlorobiaceae

Genus

Chlorobium

Description

Chlorobium limicola strain Frasassi is a Gram-negative, rod-shaped bacterium that typically exists in chains or as single cells, and is known for its photosynthetic capabilities as a photoautotroph. This organism thrives in aquatic environments, where it plays a significant role in the cycling of nutrients and energy within its ecosystem. As an anaerobe, Chlorobium limicola strain Frasassi relies on light for energy while utilizing carbon dioxide for growth, contributing to the biological processes in light-limited habitats. The ability of this strain to perform photosynthesis in anaerobic conditions suggests a unique adaptation to its environment, allowing it to exploit light energy in settings where oxygen is scarce. This trait not only highlights its ecological role in aquatic ecosystems but also underscores the importance of anaerobic phototrophs in global carbon cycling. By converting light energy into chemical energy, Chlorobium limicola strain Frasassi aids in the sustenance of microbial communities, potentially influencing the dynamics of food webs in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumChlorobiota
ClassChlorobiia
OrderChlorobiales
FamilyChlorobiaceae
GenusChlorobium
SpeciesChlorobium limicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Chlorobium limicola str. Frasassi
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourcePhotosynthetic - Photoautotroph
PathogenicityNot Available

Genome Summary

Chlorobium limicola str. Frasassi

Accession NumberLMBR00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1841 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+206 - 314Not Available
23s ribosomal rnaNot AvailableNot Available+395 - 3342Not Available
phosphoenolpyruvate carboxylaseASB62_00005Not Available-397 - 3165103892.0
cytochrome cASB62_00010Not Available+3459 - 416025109.7
16s ribosomal rnaNot AvailableNot Available+3829 - 5332Not Available
Ncrna_class:rnase_p_rnaNot AvailableNot Available+4255 - 4662Not Available
7-cyano-7-deazaguanine reductaseASB62_00015Not Available-4242 - 459513374.0
methyltransferase type 12ASB62_00020Not Available+4738 - 544526075.3
hypothetical proteinASB62_00025Not Available+5438 - 629532486.6
recombinase xercASB62_00030Not Available+6292 - 730538415.4

Displaying genes 1 – 10 of 1881 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites