Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein, ybab/ebfc family | NCTC12722_00701 | Not Available | + | 708696 - 709013 | 11484.1 |
| recombination protein recr | NCTC12722_00702 | Not Available | + | 709015 - 709620 | 21463.0 |
| muropeptide transporter | NCTC12722_00703 | Not Available | - | 709624 - 710979 | 48067.1 |
| dna recombination protein rmuc | NCTC12722_00704 | Not Available | - | 711029 - 712234 | 44459.6 |
| peptide deformylase | NCTC12722_00705 | Not Available | + | 712340 - 712909 | 21306.8 |
| methionyl-trna formyltransferase | NCTC12722_00706 | Not Available | + | 712921 - 713853 | 32892.2 |
| trna pseudouridine synthase a | NCTC12722_00707 | Not Available | + | 713853 - 714590 | 27220.5 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | NCTC12722_00708 | Not Available | - | 714584 - 715156 | 20809.9 |
| succinyl-diaminopimelate desuccinylase | NCTC12722_00709 | Not Available | - | 715167 - 716321 | 41118.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | NCTC12722_00710 | Not Available | - | 716325 - 717170 | 29920.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.