Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrp-l28 | NCTC12722_00631 | Not Available | - | 634648 - 634941 | 10548.9 |
| protein of uncharacterised function (duf3108) | NCTC12722_00632 | Not Available | + | 635222 - 636055 | 29622.9 |
| superfamily ii rna helicase | NCTC12722_00633 | Not Available | + | 636395 - 639601 | 116685.0 |
| s4 domain | NCTC12722_00634 | Not Available | + | 639656 - 639880 | 8019.75 |
| ferredoxin ii | NCTC12722_00635 | Not Available | + | 639973 - 640311 | 12568.7 |
| card-like/trcf domain | NCTC12722_00636 | Not Available | + | 640469 - 641467 | 35168.0 |
| uncharacterized metalloprotease yggg | NCTC12722_00637 | Not Available | - | 641559 - 643046 | 54050.0 |
| staphylococcal nuclease homologue | NCTC12722_00638 | Not Available | - | 643051 - 643860 | 28677.3 |
| transglycosylase associated protein | NCTC12722_00639 | Not Available | - | 643865 - 644134 | 9206.49 |
| uncharacterized protein conserved in bacteria | NCTC12722_00640 | Not Available | - | 644177 - 644773 | 19607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.