Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-hydroxyalkanoate depolymerase | NCTC12722_00570 | Not Available | + | 569148 - 570533 | 51373.1 |
| protein of uncharacterised function duf45 | NCTC12722_00571 | Not Available | + | 570872 - 571627 | 28592.8 |
| penicillin-binding protein 4 precursor | NCTC12722_00572 | Not Available | - | 571643 - 573919 | 81492.2 |
| pii uridylyl-transferase | NCTC12722_00573 | Not Available | - | 574026 - 576857 | 106432.0 |
| dna mismatch repair protein muts | NCTC12722_00574 | Not Available | - | 577004 - 579736 | 97831.2 |
| patatin-like phospholipase | NCTC12722_00575 | Not Available | - | 579823 - 580953 | 41216.9 |
| zinc uptake regulation protein | NCTC12722_00576 | Not Available | + | 581131 - 581619 | 17567.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | NCTC12722_00577 | Not Available | + | 581816 - 583108 | 46082.5 |
| sodium, potassium, lithium and rubidium/h(+) antiporter | NCTC12722_00578 | Not Available | - | 583181 - 584788 | 58647.8 |
| predicted membrane protein | NCTC12722_00579 | Not Available | - | 584797 - 585513 | 26092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.