Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methane monooxygenase component c | NCTC12722_00540 | Not Available | - | 545257 - 545985 | 26824.3 |
| tmao/dmso reductase | NCTC12722_00541 | Not Available | - | 545978 - 546583 | 22601.6 |
| predicted membrane protein | NCTC12722_00542 | Not Available | - | 546707 - 547261 | 20708.0 |
| sporulation kinase a | NCTC12722_00543 | Not Available | + | 547664 - 548962 | 45798.8 |
| protein required for attachment to host cells | NCTC12722_00544 | Not Available | + | 549005 - 549406 | 14154.8 |
| putative peroxiredoxin bcp | NCTC12722_00545 | Not Available | + | 549558 - 550223 | 24463.5 |
| 3-ketoacyl-coa thiolase | NCTC12722_00546 | Not Available | + | 550880 - 551638 | 27378.1 |
| (s)-2-haloacid dehalogenase 4a | Not Available | Not Available | - | 551673 - 552440 | 27779.2 |
| mercuric reductase | NCTC12722_00548 | Not Available | - | 552448 - 553797 | 48476.8 |
| mercuric reductase | NCTC12722_00549 | Not Available | - | 553952 - 555385 | 49605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.