Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit | NCTC12722_03628 | Not Available | - | 3716873 - 3718021 | 43580.0 |
| uncharacterised protein | NCTC12722_03629 | Not Available | + | 3718148 - 3718348 | 7546.95 |
| uncharacterised protein | NCTC12722_03630 | Not Available | + | 3718352 - 3718723 | 14822.3 |
| hth-type transcriptional regulator yofa | NCTC12722_03631 | Not Available | + | 3719233 - 3720030 | 29546.2 |
| outer membrane protein oprm precursor | NCTC12722_03632 | Not Available | - | 3720090 - 3721691 | 56942.9 |
| cation efflux system protein czca | NCTC12722_03633 | Not Available | - | 3721688 - 3724945 | 117197.0 |
| probable efflux pump periplasmic linker ttga precursor | NCTC12722_03634 | Not Available | - | 3724987 - 3725967 | 35105.2 |
| transcriptional regulatory protein basr | NCTC12722_03635 | Not Available | + | 3726520 - 3727194 | 24622.0 |
| sensor protein qsec | NCTC12722_03636 | Not Available | + | 3727200 - 3728558 | 50181.8 |
| uncharacterised protein | NCTC12722_03637 | Not Available | + | 3729121 - 3729399 | 10848.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.