Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein ccog | NCTC12722_03588 | Not Available | - | 3672514 - 3674070 | 57929.4 |
| cytochrome c oxidase subunit iii | NCTC12722_03589 | Not Available | - | 3674186 - 3675055 | 30918.3 |
| cbb3-type cytochrome oxidase, subunit 3 | NCTC12722_03590 | Not Available | - | 3675057 - 3675209 | 5689.86 |
| cbb3-type cytochrome c oxidase subunit ii | NCTC12722_03591 | Not Available | - | 3675220 - 3675951 | 27145.2 |
| nitric oxide reductase subunit b | NCTC12722_03592 | Not Available | - | 3675965 - 3677587 | 61397.6 |
| aliphatic nitrilase | NCTC12722_03593 | Not Available | - | 3677762 - 3678808 | 37857.9 |
| mandelate racemase | NCTC12722_03594 | Not Available | - | 3678848 - 3679966 | 39769.4 |
| hca operon transcriptional activator | NCTC12722_03595 | Not Available | - | 3680198 - 3681085 | 32606.7 |
| d-malate degradation protein r | NCTC12722_03596 | Not Available | + | 3681423 - 3682316 | 33434.6 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | NCTC12722_03597 | Not Available | - | 3682355 - 3683635 | 46917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.