Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type taurine transport system, periplasmic component | NCTC12722_03578 | Not Available | + | 3662375 - 3663391 | 36660.6 |
| glucarate dehydratase | NCTC12722_03579 | Not Available | + | 3663424 - 3664764 | 49165.7 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | NCTC12722_03580 | Not Available | + | 3664786 - 3665574 | 28177.1 |
| cyclic di-gmp phosphodiesterase gmr | NCTC12722_03581 | Not Available | - | 3665590 - 3668514 | 107643.0 |
| uncharacterised protein | NCTC12722_03582 | Not Available | + | 3668739 - 3669098 | 13076.0 |
| uncharacterised protein | NCTC12722_03583 | Not Available | - | 3669144 - 3670208 | 38996.4 |
| uncharacterised protein | NCTC12722_03584 | Not Available | + | 3670457 - 3670618 | 5432.67 |
| cytochrome c551 peroxidase precursor | NCTC12722_03585 | Not Available | - | 3670669 - 3671691 | 37153.2 |
| uncharacterized protein, possibly involved in nitrogen fixation | NCTC12722_03586 | Not Available | - | 3671809 - 3671973 | 5767.93 |
| predicted integral membrane protein linked to a cation pump | NCTC12722_03587 | Not Available | - | 3672023 - 3672517 | 18052.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.