Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-dehydroascorbate transporter large permease subunit | NCTC12722_03568 | Not Available | - | 3650604 - 3652736 | 76243.9 |
| abc-type taurine transport system, periplasmic component | NCTC12722_03569 | Not Available | - | 3652890 - 3653843 | 33516.4 |
| uncharacterised protein | NCTC12722_03570 | Not Available | + | 3653930 - 3655144 | 44510.2 |
| cytochrome c | NCTC12722_03571 | Not Available | - | 3655171 - 3655734 | 19529.3 |
| oxidoreductase molybdopterin binding domain | NCTC12722_03572 | Not Available | - | 3655715 - 3657007 | 47098.0 |
| cytochrome c | NCTC12722_03573 | Not Available | - | 3657368 - 3657934 | 20016.1 |
| oxidoreductase molybdopterin binding domain | NCTC12722_03574 | Not Available | - | 3657921 - 3659324 | 51485.3 |
| hth-type transcriptional repressor nemr | NCTC12722_03575 | Not Available | + | 3659627 - 3660211 | 21274.9 |
| predicted permeases | NCTC12722_03576 | Not Available | + | 3660337 - 3661287 | 34606.0 |
| hca operon transcriptional activator | NCTC12722_03577 | Not Available | - | 3661291 - 3662193 | 33283.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.