Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory proteins, tetr family | NCTC12722_03517 | Not Available | - | 3602396 - 3602974 | 19732.0 |
| uncharacterised protein | NCTC12722_03518 | Not Available | + | 3603131 - 3603379 | 9300.17 |
| atp-dependent zinc metalloprotease ftsh | NCTC12722_03519 | Not Available | - | 3603406 - 3605322 | 69925.5 |
| trna(ile)-lysidine synthase | NCTC12722_03520 | Not Available | - | 3605521 - 3606564 | 37331.2 |
| tol-pal system protein ybgf | NCTC12722_03521 | Not Available | - | 3606539 - 3607588 | 37090.4 |
| minor outer membrane protein omp16 | NCTC12722_03522 | Not Available | - | 3607728 - 3608222 | 18028.4 |
| translocation protein tolb | NCTC12722_03523 | Not Available | - | 3608467 - 3609810 | 48607.6 |
| protein tola | NCTC12722_03524 | Not Available | - | 3609846 - 3610787 | 34697.5 |
| biopolymer transport protein exbd | NCTC12722_03525 | Not Available | - | 3610789 - 3611241 | 15933.6 |
| colicin uptake protein tolq | NCTC12722_03526 | Not Available | - | 3611262 - 3611975 | 26061.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.