Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkanesulfonate transporter substrate-binding subunit | NCTC12722_02909 | Not Available | - | 2991802 - 2992812 | 36169.8 |
| putative aliphatic sulfonates transport permease protein ssuc | NCTC12722_02910 | Not Available | - | 2992875 - 2993771 | 32481.3 |
| bicarbonate transport atp-binding protein cmpd | NCTC12722_02911 | Not Available | - | 2993764 - 2994561 | 29935.7 |
| methylmalonate-semialdehyde dehydrogenase | NCTC12722_02912 | Not Available | - | 2994998 - 2996497 | 53980.7 |
| cysji operon transcriptional activator | NCTC12722_02913 | Not Available | + | 2996634 - 2997521 | 33413.3 |
| serine/threonine-protein kinase pknd | NCTC12722_02914 | Not Available | - | 2997560 - 2998633 | 39053.5 |
| spectinomycin tetracycline efflux pump | NCTC12722_02915 | Not Available | + | 2998862 - 3000244 | 48063.8 |
| acyl-coa dehydrogenase, short-chain specific | NCTC12722_02916 | Not Available | + | 3000351 - 3002135 | 62727.7 |
| 4-chlorobenzoyl coenzyme a dehalogenase-2 | NCTC12722_02917 | Not Available | + | 3002292 - 3003038 | 26780.4 |
| histone deacetylase-like amidohydrolase | NCTC12722_02918 | Not Available | + | 3003090 - 3004022 | 33811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.