Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator gltc | NCTC12722_02807 | Not Available | - | 2873027 - 2873941 | 33112.6 |
| protoporphyrinogen oxidase | NCTC12722_02808 | Not Available | + | 2874024 - 2875511 | 54036.7 |
| cyclic di-gmp phosphodiesterase gmr | NCTC12722_02809 | Not Available | - | 2875508 - 2877925 | 88020.3 |
| fumarate and nitrate reduction regulatory protein | NCTC12722_02810 | Not Available | - | 2878190 - 2878939 | 28062.0 |
| uncharacterised protein | NCTC12722_02811 | Not Available | + | 2879404 - 2879619 | 7837.27 |
| succinyl-coa ligase | NCTC12722_02812 | Not Available | - | 2879649 - 2880539 | 30971.8 |
| succinyl-coa ligase | NCTC12722_02813 | Not Available | - | 2880536 - 2881663 | 39443.7 |
| succinate-semialdehyde dehydrogenase (acetylating) | NCTC12722_02814 | Not Available | - | 2881674 - 2883101 | 51570.1 |
| d-galactonate transporter | NCTC12722_02815 | Not Available | - | 2883178 - 2884461 | 46551.4 |
| tripartite tricarboxylate transporter tcta family | NCTC12722_02816 | Not Available | - | 2884666 - 2886183 | 53241.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.