Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | NCTC12722_01215 | Not Available | + | 1233804 - 1234799 | 36039.4 |
| dtdp-rha:alpha-d-glcnac-pyrophosphate polyprenol, alpha-3-l-rhamnosyltransferase | NCTC12722_01216 | Not Available | + | 1235020 - 1240038 | 186282.0 |
| rhamnan synthesis protein f | NCTC12722_01217 | Not Available | + | 1240081 - 1241307 | 46034.0 |
| uncharacterized conserved protein | NCTC12722_01218 | Not Available | + | 1241463 - 1242689 | 42434.4 |
| cyclic di-gmp phosphodiesterase gmr | NCTC12722_01219 | Not Available | + | 1242702 - 1243748 | 38949.7 |
| cyclic di-gmp phosphodiesterase gmr | NCTC12722_01220 | Not Available | + | 1243762 - 1244715 | 35386.3 |
| arabinose metabolism transcriptional repressor | NCTC12722_01221 | Not Available | - | 1244839 - 1245519 | 25787.4 |
| glutamate/aspartate periplasmic-binding protein precursor | NCTC12722_01222 | Not Available | + | 1245756 - 1246637 | 32320.1 |
| probable amino-acid permease protein yxen | NCTC12722_01223 | Not Available | + | 1246681 - 1247403 | 27058.3 |
| glutamate/aspartate transport system permease protein gltk | NCTC12722_01224 | Not Available | + | 1247403 - 1248056 | 24035.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.