Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate 1-dehydrogenase | NCTC12722_01034 | Not Available | - | 1047030 - 1048556 | 56922.3 |
| 6-phosphogluconate dehydrogenase, decarboxylating | NCTC12722_01035 | Not Available | - | 1048571 - 1049605 | 37244.5 |
| transaldolase | NCTC12722_01036 | Not Available | - | 1049615 - 1052458 | 102312.0 |
| transketolase | NCTC12722_01037 | Not Available | - | 1052455 - 1054548 | 75829.2 |
| protein of uncharacterised function (duf3297) | NCTC12722_01038 | Not Available | + | 1054891 - 1055127 | 8885.49 |
| (s)-2-haloacid dehalogenase | NCTC12722_01039 | Not Available | - | 1055128 - 1055865 | 27312.1 |
| protein of uncharacterised function (duf3175) | NCTC12722_01040 | Not Available | + | 1055953 - 1056372 | 15744.1 |
| trp repressor-binding protein | NCTC12722_01041 | Not Available | - | 1056405 - 1057004 | 20941.0 |
| uncharacterised protein | NCTC12722_01042 | Not Available | - | 1057063 - 1057155 | 3326.32 |
| quercetin 2,3-dioxygenase | NCTC12722_01043 | Not Available | - | 1057152 - 1057853 | 25328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.