Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-galactarate dehydratase | NCTC12722_01004 | Not Available | - | 1018490 - 1020013 | 53642.2 |
| gcv operon activator | NCTC12722_01005 | Not Available | + | 1020207 - 1021079 | 31987.7 |
| cyn operon transcriptional activator | NCTC12722_01006 | Not Available | - | 1021113 - 1022039 | 34145.9 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | NCTC12722_01007 | Not Available | + | 1022372 - 1023565 | 42469.8 |
| liv-i protein h | NCTC12722_01008 | Not Available | + | 1023677 - 1024552 | 30215.2 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC12722_01009 | Not Available | + | 1024549 - 1026348 | 64245.8 |
| liv-i protein f | NCTC12722_01010 | Not Available | + | 1026351 - 1027103 | 27051.1 |
| kynurenine formamidase | NCTC12722_01011 | Not Available | + | 1027121 - 1027819 | 25967.3 |
| glutamyl-trna(gln) amidotransferase subunit a | NCTC12722_01012 | Not Available | + | 1027934 - 1029352 | 49634.6 |
| hypoxic response protein 1 | NCTC12722_01013 | Not Available | + | 1029673 - 1030104 | 15699.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.