Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia felis
Accession NumberUIGB00000000.1
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | NCTC12722_00954 | Not Available | - | 962703 - 964322 | 59076.9 |
| hth-type transcriptional repressor cytr | NCTC12722_00955 | Not Available | - | 964682 - 965689 | 35466.1 |
| bicarbonate transport system permease protein cmpb | NCTC12722_00956 | Not Available | + | 965850 - 966626 | 27906.2 |
| bicarbonate transport system permease protein cmpb | NCTC12722_00957 | Not Available | + | 966628 - 967413 | 27819.1 |
| bicarbonate transport atp-binding protein cmpd | NCTC12722_00958 | Not Available | + | 967426 - 968223 | 29344.6 |
| sulfate starvation-induced protein 1 | NCTC12722_00959 | Not Available | + | 968265 - 969323 | 37976.2 |
| sulfopropanediol 3-dehydrogenase | NCTC12722_00960 | Not Available | + | 969384 - 970697 | 47274.5 |
| gluconate 5-dehydrogenase | NCTC12722_00961 | Not Available | + | 970701 - 971465 | 26433.5 |
| sorbitol dehydrogenase | NCTC12722_00962 | Not Available | + | 971475 - 972470 | 34797.0 |
| uncharacterised protein | NCTC12722_00963 | Not Available | - | 972565 - 973440 | 30511.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.