Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Genome Summary
Flavobacterium columnare
Accession NumberOLKH00000000.1
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | FLACOL_00947 | Not Available | + | 1123407 - 1123919 | 18332.2 |
| glutamate racemase | FLACOL_00948 | Not Available | - | 1124070 - 1124891 | 30710.6 |
| periplasmic chaperone | FLACOL_00949 | Not Available | - | 1124925 - 1125425 | 18826.9 |
| outer membrane protein (omph-like) | FLACOL_00950 | Not Available | - | 1125450 - 1126472 | 40111.7 |
| outer membrane protein assembly factor bama precursor | FLACOL_00951 | Not Available | - | 1126547 - 1129189 | 98999.0 |
| ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-farnesyl-diphosphate specific) | FLACOL_00952 | Not Available | - | 1129212 - 1129952 | 28620.5 |
| hypothetical protein | FLACOL_00953 | Not Available | - | 1129952 - 1130632 | 25800.4 |
| putative inorganic polyphosphate/atp-nad kinase | FLACOL_00954 | Not Available | - | 1130956 - 1131840 | 32889.9 |
| cbs domain protein | FLACOL_00955 | Not Available | - | 1131905 - 1132564 | 25382.7 |
| pyridoxine 5'-phosphate synthase | FLACOL_00956 | Not Available | + | 1132689 - 1133414 | 26917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.