Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Genome Summary
Flavobacterium columnare
Accession NumberOLKH00000000.1
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_01907 | Not Available | - | 2234503 - 2235210 | 26244.0 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | FLACOL_01908 | Not Available | + | 2235700 - 2237217 | 56030.8 |
| udp-glucose 4-epimerase | FLACOL_01909 | Not Available | - | 2237402 - 2238415 | 37383.7 |
| udp-2-acetamido-2-deoxy-3-oxo-d-glucuronate aminotransferase | FLACOL_01910 | Not Available | - | 2238464 - 2239594 | 41703.1 |
| 3-deoxy-d-manno-octulosonic acid transferase | FLACOL_01911 | Not Available | + | 2239688 - 2240920 | 47033.6 |
| acetyltransferase (gnat) family protein | FLACOL_01912 | Not Available | + | 2240917 - 2241366 | 17541.4 |
| sensory transduction protein lytr | FLACOL_01913 | Not Available | - | 2241748 - 2242467 | 27987.9 |
| sensor histidine kinase ypda | FLACOL_01914 | Not Available | - | 2242454 - 2243551 | 43109.7 |
| peptidase s46 | FLACOL_01915 | Not Available | + | 2244426 - 2246585 | 81858.7 |
| hypothetical protein | FLACOL_01916 | Not Available | + | 2246795 - 2246980 | 5940.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.