Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Genome Summary
Flavobacterium columnare
Accession NumberOLKH00000000.1
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | FLACOL_01336 | Not Available | - | 1528471 - 1529277 | 29214.9 |
| dna replication and repair protein recf | FLACOL_01337 | Not Available | + | 1529409 - 1530488 | 42194.0 |
| thioredoxin | FLACOL_01338 | Not Available | + | 1530519 - 1531211 | 26250.9 |
| hypothetical protein | FLACOL_01339 | Not Available | + | 1531536 - 1532210 | 26528.7 |
| udp-n-acetylenolpyruvoylglucosamine reductase | FLACOL_01340 | Not Available | + | 1532286 - 1533299 | 37808.2 |
| hypothetical protein | FLACOL_01341 | Not Available | - | 1533417 - 1533512 | 3597.54 |
| phytanoyl-coa dioxygenase (phyh) | FLACOL_01342 | Not Available | + | 1533619 - 1534320 | 27221.9 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | FLACOL_01343 | Not Available | + | 1534710 - 1535753 | 40330.7 |
| ecf rna polymerase sigma factor sigw | FLACOL_01344 | Not Available | + | 1535744 - 1536292 | 21415.7 |
| dna adenine methyltransferase yhdj | FLACOL_01345 | Not Available | + | 1536865 - 1537749 | 34232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.