Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Genome Summary
Flavobacterium columnare
Accession NumberOLKH00000000.1
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 3'-5' exonuclease related to the exonuclease domain of polb | FLACOL_01206 | Not Available | - | 1384096 - 1384809 | 27726.2 |
| methylated-dna--protein-cysteine methyltransferase | FLACOL_01207 | Not Available | - | 1384876 - 1385346 | 17531.2 |
| cytochrome c | FLACOL_01208 | Not Available | - | 1385512 - 1385883 | 13917.0 |
| delta-aminolevulinic acid dehydratase | FLACOL_01209 | Not Available | - | 1385979 - 1386974 | 36953.8 |
| hypothetical protein | FLACOL_01210 | Not Available | - | 1386991 - 1388025 | 41016.7 |
| coproporphyrinogen-iii oxidase, aerobic | FLACOL_01211 | Not Available | - | 1388028 - 1388933 | 35072.6 |
| hypothetical protein | FLACOL_01212 | Not Available | - | 1389000 - 1389584 | 22124.7 |
| uroporphyrinogen decarboxylase | FLACOL_01213 | Not Available | - | 1389869 - 1390930 | 39424.9 |
| uroporphyrinogen-iii synthase | FLACOL_01214 | Not Available | - | 1390973 - 1391671 | 26480.4 |
| porphobilinogen deaminase | FLACOL_01215 | Not Available | - | 1391759 - 1392724 | 35704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.