Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Genome Summary
Flavobacterium columnare
Accession NumberOLKH00000000.1
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative ribosomal n-acetyltransferase ydaf | FLACOL_00957 | Not Available | + | 1133507 - 1134109 | 23548.2 |
| esterase ybff | FLACOL_00958 | Not Available | + | 1134123 - 1134920 | 30030.0 |
| membrane protein of unknown function | FLACOL_00959 | Not Available | + | 1135002 - 1135340 | 12441.3 |
| trigger factor | FLACOL_00960 | Not Available | + | 1135436 - 1136764 | 50526.6 |
| atp-dependent clp protease proteolytic subunit | FLACOL_00961 | Not Available | + | 1137024 - 1137680 | 24590.8 |
| atp-dependent clp protease atp-binding subunit clpx | FLACOL_00962 | Not Available | + | 1137745 - 1138974 | 45535.3 |
| gh3 auxin-responsive promoter | FLACOL_00963 | Not Available | - | 1139149 - 1140660 | 58541.9 |
| hypothetical protein | FLACOL_00964 | Not Available | + | 1140757 - 1141551 | 30672.2 |
| putative assembly protein | FLACOL_00965 | Not Available | - | 1141732 - 1144359 | 96095.1 |
| protease 4 | FLACOL_00966 | Not Available | - | 1144464 - 1146233 | 65804.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.