Flavobacterium hydatis str. DSM 2063

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium hydatis strain DSM 2063 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. As a member of the Flavobacteriaceae family, this organism exhibits characteristics typical of its genus, including a distinctive yellow pigmentation that is often associated with its metabolic processes. The Gram-negative cell wall structure of F. hydatis contributes to its sensitivity to certain antibiotics and its ability to survive in diverse aquatic environments. This bacterium's optimal growth temperature of 25.0°C suggests a preference for mesophilic conditions, indicating that it may be well-adapted to temperate aquatic habitats. F. hydatis is likely involved in the decomposition of organic matter within these environments, contributing to nutrient cycling and potentially influencing microbial community dynamics. Additionally, the presence of this microorganism in freshwater ecosystems may play a role in the degradation of complex organic compounds, which can enhance the availability of nutrients for other organisms within the ecosystem. The metabolic capabilities of Flavobacterium hydatis strain DSM 2063 can thus provide insights into the ecological functions of microbial communities in aquatic systems, highlighting its potential importance in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium hydatis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium hydatis str. DSM 2063

Accession NumberJPRM00000000.1

Gene Summary

Adenine Count

1992839 bp

Thymine Count

1964994 bp

Guanine Count

951046 bp

Cytosine Count

968792 bp

Genome Length

5877671 bp

Protein-coding Genes

4666 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dead/deah box helicaseIW20_15650Not Available-3448179 - 344951349268.1
dead/deah box helicaseIW20_15655Not Available-3449972 - 345151058900.4
hypothetical proteinIW20_15660Not Available-3451619 - 345215221194.8
membrane proteinIW20_15665Not Available+3452257 - 345254110821.9
mechanosensitive ion channel protein mscsIW20_15670Not Available+3452534 - 345379048458.0
thioesteraseIW20_15675Not Available-3453896 - 345427914603.9
glyoxalaseIW20_15680Not Available+3454350 - 345475115508.7
hypothetical proteinIW20_15685Not Available-3454867 - 345660966027.6
hypothetical proteinIW20_15690Not Available-3457226 - 34574357332.99
peptidase m1IW20_15695Not Available-3457665 - 345932063855.8

Displaying genes 2921 – 2930 of 4747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites