Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica str. DAU203

Accession NumberNZ_CP015172.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieA5M85_RS03345Not Available+744697 - 74542526839.5
porin family proteinA5M85_RS03350Not Available+745440 - 74613526588.6
trmh family rna methyltransferaseA5M85_RS03355Not Available-746139 - 74686426888.6
bama/tama family outer membrane proteinA5M85_RS03360Not Available+746889 - 74946598090.0
class ii fructose-bisphosphate aldolaseA5M85_RS03365Not Available+749524 - 75059139002.1
acetyl-coa carboxylase, carboxyltransferase subunit betaA5M85_RS03370Not Available+750625 - 75150332382.2
30s ribosomal protein s15A5M85_RS03375Not Available+751707 - 75197610484.8
polyribonucleotide nucleotidyltransferaseA5M85_RS03380Not Available+752195 - 75443882541.3
vwa domain-containing proteinA5M85_RS03385Not Available+754588 - 75529525283.6
pyrroline-5-carboxylate reductaseA5M85_RS03390Not Available+755628 - 75643429688.8

Displaying genes 671 – 680 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites