Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica str. DAU203

Accession NumberNZ_CP015172.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cytochrome d ubiquinol oxidase subunit iiA5M85_RS16900Not Available+3854348 - 385542440294.0
xre family transcriptional regulatorA5M85_RS16905Not Available+3855547 - 385632028968.8
exonuclease domain-containing proteinA5M85_RS16910Not Available+3856317 - 385766051069.5
ychj family proteinA5M85_RS16915Not Available-3857662 - 385804815069.9
pas domain s-box proteinA5M85_RS16920Not Available+3858320 - 386061486425.8
response regulatorA5M85_RS16925Not Available+3860621 - 386102515401.7
phosphoribosylaminoimidazolesuccinocarboxamide synthaseA5M85_RS16930Not Available-3861073 - 386202336111.4
phoh family proteinA5M85_RS16935Not Available-3862033 - 386298635735.5
s-adenosyl-l-methionine hydroxide adenosyltransferase family proteinA5M85_RS16940Not Available+3863115 - 386394530707.8
putative quinol monooxygenaseA5M85_RS16945Not Available+3863946 - 386424211630.8

Displaying genes 3401 – 3410 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites