Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica str. DAU203

Accession NumberNZ_CP015172.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hsp20/alpha crystallin family proteinA5M85_RS15190Not Available-3476568 - 347704417791.9
arac family transcriptional regulatorA5M85_RS15195Not Available-3477166 - 347806234858.9
alpha-ketoglutarate-dependent dioxygenase alkb family proteinA5M85_RS15200Not Available+3478227 - 347885624735.7
nad(p)h-dependent oxidoreductaseA5M85_RS15205Not Available+3479072 - 347974625792.8
zinc-binding alcohol dehydrogenase family proteinA5M85_RS15210Not Available+3479755 - 348076236867.1
duf4437 domain-containing proteinA5M85_RS15215Not Available+3480804 - 348163730494.0
l-dopachrome tautomerase-related proteinA5M85_RS15220Not Available+3481637 - 348274640993.7
arac family transcriptional regulatorA5M85_RS15225Not Available+3482863 - 348372933433.2
enoyl-coa hydratase/isomerase family proteinA5M85_RS15230Not Available+3483941 - 348478631274.4
zinc-dependent alcohol dehydrogenase family proteinA5M85_RS15235Not Available+3484826 - 348580934402.2

Displaying genes 3051 – 3060 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites