Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EJD96_RS05020 | Not Available | - | 1055200 - 1056213 | 36380.0 |
| mfs transporter | EJD96_RS05025 | Not Available | + | 1056293 - 1057561 | 42797.1 |
| glutathione s-transferase family protein | EJD96_RS05030 | Not Available | + | 1057773 - 1058393 | 21898.4 |
| pyridoxamine 5'-phosphate oxidase family protein | EJD96_RS05035 | Not Available | + | 1058441 - 1059406 | 35167.8 |
| lysr family transcriptional regulator | EJD96_RS05040 | Not Available | + | 1059476 - 1060366 | 32675.3 |
| hipa domain-containing protein | EJD96_RS05045 | Not Available | - | 1060386 - 1061693 | 48261.2 |
| helix-turn-helix domain-containing protein | EJD96_RS05050 | Not Available | - | 1061690 - 1061965 | 9879.09 |
| lysr family transcriptional regulator | EJD96_RS05055 | Not Available | - | 1062151 - 1063125 | 36338.4 |
| histone deacetylase family protein | EJD96_RS05060 | Not Available | - | 1063173 - 1064192 | 37208.3 |
| mfs transporter | EJD96_RS05065 | Not Available | - | 1064189 - 1065520 | 47690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.