Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS04080 | Not Available | + | 826991 - 827878 | 30133.3 |
| type vi secretion system vgr family protein | EJD96_RS04085 | Not Available | + | 827962 - 830910 | 102778.0 |
| duf4123 domain-containing protein | EJD96_RS04090 | Not Available | + | 830907 - 831845 | 34371.9 |
| duf3304 domain-containing protein | EJD96_RS04095 | Not Available | + | 831842 - 832327 | 17450.8 |
| hypothetical protein | EJD96_RS04100 | Not Available | + | 832383 - 832826 | 16285.5 |
| duf3304 domain-containing protein | EJD96_RS04105 | Not Available | + | 833007 - 833447 | 15779.9 |
| t6ss phospholipase effector tle1-like catalytic domain-containing protein | EJD96_RS04110 | Not Available | + | 833479 - 835635 | 79978.3 |
| Trna-met | Not Available | Not Available | + | 835933 - 836009 | Not Available |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EJD96_RS04120 | Not Available | - | 836079 - 837026 | 34893.8 |
| dna mismatch repair endonuclease mutl | EJD96_RS04125 | Not Available | - | 837027 - 838952 | 69006.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.