Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | EJD96_RS03985 | Not Available | + | 800047 - 800535 | 17886.5 |
| type vi secretion system baseplate subunit tssf | EJD96_RS03990 | Not Available | + | 800536 - 802380 | 68003.5 |
| type vi secretion system baseplate subunit tssg | EJD96_RS03995 | Not Available | + | 802344 - 803426 | 40685.9 |
| type vi secretion system atpase tssh | EJD96_RS04000 | Not Available | + | 803465 - 806134 | 96701.9 |
| type vi secretion system vgr family protein | EJD96_RS04005 | Not Available | + | 806246 - 809110 | 100721.0 |
| duf4123 domain-containing protein | EJD96_RS04010 | Not Available | + | 809129 - 810106 | 36862.4 |
| t6ss effector bth_i2691 family protein | EJD96_RS04015 | Not Available | + | 810111 - 812930 | 103643.0 |
| putative type vi secretion system effector | EJD96_RS04020 | Not Available | + | 812931 - 813662 | 27462.4 |
| putative type vi secretion system effector | EJD96_RS04025 | Not Available | + | 813676 - 814419 | 27713.5 |
| putative type vi secretion system effector | EJD96_RS04030 | Not Available | + | 814482 - 815060 | 21307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.