Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imm71 family immunity protein | EJD96_RS03935 | Not Available | - | 787715 - 788803 | 41044.9 |
| hypothetical protein | EJD96_RS03940 | Not Available | - | 788800 - 790341 | 55806.8 |
| type vi secretion system vgr family protein | EJD96_RS03945 | Not Available | - | 790368 - 793367 | 106551.0 |
| type ivb secretion system protein icmh/dotu | EJD96_RS03950 | Not Available | - | 793405 - 794184 | 28614.5 |
| type vi secretion system baseplate subunit tssk | EJD96_RS03955 | Not Available | - | 794187 - 795533 | 49998.0 |
| type vi secretion system lipoprotein tssj | EJD96_RS03960 | Not Available | - | 795631 - 796269 | 22591.4 |
| hypothetical protein | EJD96_RS03965 | Not Available | + | 796665 - 797297 | 21725.8 |
| type vi secretion system contractile sheath small subunit | EJD96_RS03970 | Not Available | + | 797381 - 797881 | 18967.8 |
| type vi secretion system contractile sheath large subunit | EJD96_RS03975 | Not Available | + | 797893 - 799380 | 54648.4 |
| hcp family type vi secretion system effector | EJD96_RS03980 | Not Available | + | 799413 - 799904 | 17945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.