Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proteasome-type protease | EJD96_RS03440 | Not Available | - | 681004 - 681882 | 32356.4 |
| alpha-e domain-containing protein | EJD96_RS03445 | Not Available | - | 682054 - 683049 | 37882.9 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS03450 | Not Available | - | 683051 - 683995 | 34846.2 |
| polyhydroxyalkanoate depolymerase | EJD96_RS03455 | Not Available | + | 684358 - 685584 | 45486.8 |
| duf2126 domain-containing protein | EJD96_RS03460 | Not Available | + | 685779 - 689138 | 126212.0 |
| circularly permuted type 2 atp-grasp protein | EJD96_RS03465 | Not Available | + | 689233 - 691734 | 92814.5 |
| transglutaminase family protein | EJD96_RS03470 | Not Available | + | 691745 - 692680 | 34280.9 |
| sodium:solute symporter family protein | EJD96_RS03475 | Not Available | - | 692701 - 694752 | 74420.2 |
| duf4212 domain-containing protein | EJD96_RS03480 | Not Available | - | 694742 - 695026 | 11238.8 |
| sensor histidine kinase | EJD96_RS03485 | Not Available | - | 695028 - 696596 | 57764.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.