Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| retron ec67 family rna-directed dna polymerase/endonuclease | EJD96_RS00335 | Not Available | + | 15528 - 17270 | 65087.8 |
| hypothetical protein | EJD96_RS00340 | Not Available | + | 17478 - 18227 | 28128.2 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS00345 | Not Available | - | 19053 - 19262 | 8419.84 |
| is3 family transposase | EJD96_RS00350 | Not Available | + | 19359 - 20539 | 44118.6 |
| hypothetical protein | EJD96_RS00355 | Not Available | + | 20682 - 22124 | 54520.7 |
| amino acid abc transporter substrate-binding protein | EJD96_RS00360 | Not Available | + | 22324 - 23259 | 34266.4 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EJD96_RS00365 | Not Available | + | 23336 - 25633 | 85139.2 |
| duf4148 domain-containing protein | EJD96_RS00370 | Not Available | - | 25695 - 25985 | 9906.68 |
| heavy metal response regulator transcription factor | EJD96_RS00375 | Not Available | + | 26188 - 26877 | 26526.1 |
| heavy metal sensor histidine kinase | EJD96_RS00380 | Not Available | + | 26874 - 28277 | 51499.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.